skip to content
hEIDI
User Tools
Site Tools
Search
Tools
Old revisions
Backlinks
Recent Changes
Media Manager
Sitemap
>
Recent Changes
Media Manager
Sitemap
Trace:
•
how_to
how_to:start
This is an old revision of the document!
−
Table of Contents
How to
Creation/Suppression
Visualization
Save and export
Algorithm and other operation
How to
Creation/Suppression
create a
connection to a database
create an hEIDI Project
open a MS Identification session
to explore MSIdb content
create new contexts to organize and compile identification results
reopen an existing hEIDI Project
delete a context
get Sample/Run informations from ePims
Visualization
browse context's protein groups
visualize all context's peptides
visualize protein groups
information details
generate a graph (histograms, plots...) on peptides features
access identification general informations (parse parameters, filters, statistic, FDR)
view and edit identification informations (general information ans run/sample)
run and/or view spectral count data
access object properties, show/hide columns in a tree view, filter columns in a tree view
Save and export
export identified proteins & peptides from a context
export a comparison result
save/load a comparison result
generate a new AMT database from a context
save modifications back to the MSIdb
export an SQL result to a file
include UMCs in AMTdb
export context to PRIDE XML format
Algorithm and other operation
group proteins within a context
filter proteins or protein groups
reset protein/protein group filter
compare multiple contexts
compare a context with an external accession list
run and/or view spectral count data
check that all identifications have been filtered with the same parameters
write SQL Queries to explore database
change typical protein
align retention time
recompute retention time
how_to/start.1296555172.txt.gz
· Last modified: 2011/02/01 11:12 by
132.168.74.230
Page Tools
Old revisions
Backlinks
Back to top