Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 56 lcl|Aclame:protein:vir:95875|NCBI_annot:major HHsearch (proba=100.00%)
Portal 59 lcl|Aclame:protein:vir:95821|NCBI_annot:94 HHsearch (proba=100.00%)
TermL 68 lcl|Aclame:protein:vir:95873|NCBI_annot:gp68|genbank:acc:YP_950546;genbank:gi:119952237;genbank:Gene Blast (e-value=0)
MTP NOT FOUND
Sheath NOT FOUND
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 67 lcl|Aclame:protein:vir:95880|NCBI_annot:30 HHsearch (proba=100.00%)
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:95875
protein:vir:105334
protein:vir:97433
N4
PH15
92
100 %
16 %
16 %
Portal protein:vir:95821
protein:vir:8846
protein:vir:94599
N4
PaP3
Pf-WMP4
100 %
18 %
16 %
TermL protein:vir:95873
protein:vir:103223
protein:vir:79222
N4
JK06
Phage MP22
100 %
21 %
19 %
Ad3 protein:vir:95880
protein:vir:5111
protein:vir:105573
N4
PBC5
F116
100 %
13 %
14 %