Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 7 lcl|Aclame:protein:vir:105334|NCBI_annot:putative HHsearch (proba=100.00%)
Portal 4 lcl|Aclame:protein:vir:105292|NCBI_annot:putative HHsearch (proba=100.00%)
TermL 2 lcl|Aclame:protein:vir:105297|NCBI_annot:putative Blast (e-value=0)
MTP 13 lcl|Aclame:protein:vir:105312|NCBI_annot:conserved Blast (e-value=1e-103)
Sheath NOT FOUND
Ad1 9 lcl|Aclame:protein:vir:105327|NCBI_annot:putative HHsearch (proba=100.00%)
Hc1 10 lcl|Aclame:protein:vir:105322|NCBI_annot:conserved HHsearch (proba=100.00%)
Ne1 11 lcl|Aclame:protein:vir:105330|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Tc1 12 lcl|Aclame:protein:vir:105337|NCBI_annot:conserved HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:105334
protein:vir:96123
protein:vir:96262
PH15
37
ROSA
100 %
81 %
80 %
Portal protein:vir:105292
protein:vir:107112
protein:vir:96839
PH15
CNPH82
EW
100 %
98 %
78 %
TermL protein:vir:105297
protein:vir:107098
protein:vir:97448
PH15
CNPH82
92
100 %
96 %
88 %
MTP protein:vir:105312
protein:vir:107114
protein:vir:97420
PH15
CNPH82
92
100 %
100 %
78 %
Ad1 protein:vir:105327
protein:vir:107119
protein:vir:96128
PH15
CNPH82
37
100 %
100 %
64 %
Hc1 protein:vir:105322
protein:vir:107100
protein:vir:97328
PH15
CNPH82
52A
100 %
97 %
78 %
Ne1 protein:vir:105330
protein:vir:107099
protein:vir:95062
PH15
CNPH82
X2
100 %
98 %
84 %
Tc1 protein:vir:105337
protein:vir:107096
protein:vir:94794
PH15
CNPH82
29
100 %
99 %
92 %