Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 8 lcl|Aclame:protein:vir:107120|NCBI_annot:conserved HHsearch (proba=100.00%)
Portal 3 lcl|Aclame:protein:vir:107112|NCBI_annot:putative HHsearch (proba=100.00%)
TermL 2 lcl|Aclame:protein:vir:107098|NCBI_annot:putative Blast (e-value=0)
MTP 14 lcl|Aclame:protein:vir:107114|NCBI_annot:hypothetical Blast (e-value=1e-103)
Sheath NOT FOUND
Ad1 10 lcl|Aclame:protein:vir:107119|NCBI_annot:conserved HHsearch (proba=100.00%)
Hc1 11 lcl|Aclame:protein:vir:107100|NCBI_annot:conserved HHsearch (proba=100.00%)
Ne1 12 lcl|Aclame:protein:vir:107099|NCBI_annot:conserved HHsearch (proba=100.00%)
Tc1 13 lcl|Aclame:protein:vir:107096|NCBI_annot:conserved HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:107120
protein:vir:97331
protein:vir:94800
CNPH82
52A
29
100 %
84 %
84 %
Portal protein:vir:107112
protein:vir:105292
protein:vir:96839
CNPH82
PH15
EW
100 %
98 %
77 %
TermL protein:vir:107098
protein:vir:105297
protein:vir:97448
CNPH82
PH15
92
100 %
98 %
92 %
MTP protein:vir:105312
protein:vir:107114
protein:vir:97420
PH15
CNPH82
92
100 %
100 %
78 %
Ad1 protein:vir:105327
protein:vir:107119
protein:vir:96128
PH15
CNPH82
37
100 %
100 %
64 %
Hc1 protein:vir:107100
protein:vir:105322
protein:vir:97328
CNPH82
PH15
52A
100 %
97 %
78 %
Ne1 protein:vir:107099
protein:vir:105330
protein:vir:95062
CNPH82
PH15
X2
100 %
98 %
84 %
Tc1 protein:vir:107096
protein:vir:105337
protein:vir:1244
CNPH82
PH15
phi ETA
100 %
99 %
93 %