Virfam_CNT_anal:NC_016766

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : S-CBS4 | Genbank acc : NC_016766

Category to which the Query Phage was assigned :

The queried phage was recognized as a Siphoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 105

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	24	lcl\|NC_016766.1_cdsid_YP_005098323.1	HHsearch (proba=100.00%)
Portal	12	lcl\|NC_016766.1_cdsid_YP_005098311.1	HHsearch (proba=100.00%)
TermL	10	lcl\|NC_016766.1_cdsid_YP_005098309.1	Blast (e-value=9e-12)
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	26	lcl\|NC_016766.1_cdsid_YP_005098325.1	HHsearch (proba=98.41%)
Hc1	NOT FOUND
Ne1	30	lcl\|NC_016766.1_cdsid_YP_005098329.1	HHsearch (proba=87.85%)
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:79642 protein:vir:104342 protein:vir:107687	TLS RTP T1	24 % 23 % 22 %
Portal	protein:vir:104338 protein:vir:107662 protein:vir:79647	RTP T1 TLS	24 % 23 % 22 %
TermL	protein:vir:98262 protein:vir:102747 protein:vir:98727	RB43 YS40 Ma-LMM01	21 % 21 % 20 %
Ad1	protein:vir:107756 protein:vir:5256 protein:vir:96108	BcepB1A Aaphi23 F8	31 % 26 % 27 %
Ne1	protein:vir:5978 protein:vir:97427 protein:vir:94490	SPP1 92 88	21 % 25 % 25 %