Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 62 lcl|NC_012663.1_cdsid_YP_002875730.1 HHsearch (proba=100.00%)
Portal 57 lcl|NC_012663.1_cdsid_YP_002875725.1 HHsearch (proba=98.89%)
TermL NOT FOUND
MTP NOT FOUND
Sheath NOT FOUND
Ad1 64 lcl|NC_012663.1_cdsid_YP_002875732.1 HHsearch (proba=78.87%)
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:79548
protein:vir:95512
cdtI
F10
17 %
15 %
Portal protein:vir:104259
protein:vir:6210
protein:vir:97060
T5
phBC6A52
OP1
16 %
18 %
15 %