Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 7 lcl|Aclame:protein:vir:97053|NCBI_annot:putative HHsearch (proba=100.00%)
Portal 5 lcl|Aclame:protein:vir:97060|NCBI_annot:putative HHsearch (proba=100.00%)
TermL 4 lcl|Aclame:protein:vir:97071|NCBI_annot:putative Blast (e-value=0)
MTP 12 lcl|Aclame:protein:vir:97081|NCBI_annot:hypothetical Blast (e-value=1e-118)
Sheath NOT FOUND
Ad1 8 lcl|Aclame:protein:vir:97069|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Hc1 9 lcl|Aclame:protein:vir:97076|NCBI_annot:putative HHsearch (proba=100.00%)
Ne1 10 lcl|Aclame:protein:vir:97088|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Tc1 11 lcl|Aclame:protein:vir:97070|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:97053
protein:vir:81070
protein:vir:10364
OP1
Xop411
Xp10
100 %
98 %
98 %
Portal protein:vir:97060
protein:vir:10362
protein:vir:81072
OP1
Xp10
Xop411
100 %
99 %
98 %
TermL protein:vir:97071
protein:vir:81073
protein:vir:10361
OP1
Xop411
Xp10
100 %
84 %
83 %
MTP protein:vir:10369
protein:vir:97081
protein:vir:81065
Xp10
OP1
Xop411
97 %
95 %
90 %
Ad1 protein:vir:97069
protein:vir:81069
protein:vir:10365
OP1
Xop411
Xp10
100 %
92 %
90 %
Hc1 protein:vir:97076
protein:vir:10366
protein:vir:81068
OP1
Xp10
Xop411
100 %
98 %
96 %
Ne1 protein:vir:97088
protein:vir:81067
protein:vir:10367
OP1
Xop411
Xp10
100 %
89 %
88 %
Tc1 protein:vir:97070
protein:vir:10368
protein:vir:81066
OP1
Xp10
Xop411
100 %
95 %
92 %