Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 2 lcl|Aclame:protein:vir:78186|NCBI_annot:gp2, HHsearch (proba=100.00%)
Portal 5 lcl|Aclame:protein:vir:78191|NCBI_annot:gp5, HHsearch (proba=100.00%)
TermL 4 lcl|Aclame:protein:vir:78195|NCBI_annot:gp4, Blast (e-value=0)
MTP 32 lcl|Aclame:protein:vir:78189|NCBI_annot:gp32, Blast (e-value=2e-98)
Sheath 33 lcl|Aclame:protein:vir:78206|NCBI_annot:gp33, HHsearch (proba=100.00%)
Ad1 50 lcl|Aclame:protein:vir:78179|NCBI_annot:gp50, HHsearch (proba=100.00%)
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:78186
protein:vir:104011
protein:vir:79171
phiE12-2
phi52237
phiE202
100 %
100 %
99 %
Portal protein:vir:78191
protein:vir:79207
protein:vir:103971
phiE12-2
phiE202
phi52237
100 %
99 %
99 %
TermL protein:vir:78195
protein:vir:103970
protein:vir:79177
phiE12-2
phi52237
phiE202
100 %
100 %
99 %
MTP protein:vir:79203
protein:vir:78189
protein:vir:103992
phiE202
phiE12-2
phi52237
100 %
100 %
100 %
Sheath protein:vir:78206
protein:vir:103993
protein:vir:79181
phiE12-2
phi52237
phiE202
100 %
100 %
99 %
Ad1 protein:vir:79188
protein:vir:79124
protein:vir:1155
phiE202
RSA1
phi CTX
99 %
55 %
46 %