Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 13 lcl|Aclame:protein:vir:105522|NCBI_annot:phage HHsearch (proba=100.00%)
Portal 11 lcl|Aclame:protein:vir:105520|NCBI_annot:phage HHsearch (proba=100.00%)
TermL 10 lcl|Aclame:protein:vir:105519|NCBI_annot:phage Blast (e-value=0)
MTP NOT FOUND
Sheath NOT FOUND
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 15 lcl|Aclame:protein:vir:105524|NCBI_annot:phage HHsearch (proba=100.00%)
Hc3 16 lcl|Aclame:protein:vir:105525|NCBI_annot:phage HHsearch (proba=100.00%)
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:105522
protein:vir:3525
protein:vir:105374
phiSG1
APSE-1
Sf6
100 %
82 %
80 %
Portal protein:vir:105520
protein:vir:105429
protein:vir:172
phiSG1
Sf6
HK620
100 %
81 %
81 %
TermL protein:vir:105519
protein:vir:100942
protein:vir:9262
phiSG1
ST104
ST64T
100 %
40 %
40 %
Ad3 protein:vir:105524
protein:vir:105380
protein:vir:176
phiSG1
Sf6
HK620
100 %
56 %
56 %
Hc3 protein:vir:105525
protein:vir:100960
protein:vir:9268
phiSG1
ST104
ST64T
99 %
65 %
65 %