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how_to:comparecontextwithextaccession [2010/10/28 14:28] 132.168.74.230 |
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====== How to compare a context with an external accession list ====== | ====== How to compare a context with an external accession list ====== | ||
+ | |||
+ | The purpose is to compare a list of protein accession from a text file, to all proteins contained into a | ||
===== Access ===== | ===== Access ===== | ||
+ | |||
+ | {{ :how_to:compareexternallistmenu.png|}} | ||
- **Select a context** (Search context or grouped User context) | - **Select a context** (Search context or grouped User context) | ||
- **Right-click and select ''Algorithms->Compare with->An external accession list'' menu** | - **Right-click and select ''Algorithms->Compare with->An external accession list'' menu** | ||
- | - **Select the text file that contains the accession list**. The first column is used. If several columns exist, it is assumed that fields are comma separated. | + | - **Select the text file that contains the accession list**. The first column is used. If several columns exist, it is assumed that fields are comma separated. |
- **Select the result file to write** | - **Select the result file to write** | ||
- | {{:how_to:compareexternallistmenu.png|}} | + | **__How to format your text file with accession numbers__**: |
+ | |||
+ | {{:how_to:compareexternallistexplanation.png|}} | ||
===== View result ===== | ===== View result ===== | ||
- | The comparing result file contains the following information: | + | The comparing result file contains the following information:\\ |
{{:how_to:compareexternallistresult.png|}} | {{:how_to:compareexternallistresult.png|}} |