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how_to:comparecontextwithextaccession [2010/10/28 13:59]
132.168.74.230 créée
how_to:comparecontextwithextaccession [2010/10/28 15:10] (current)
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 ====== How to compare a context with an external accession list  ====== ====== How to compare a context with an external accession list  ======
 +
 +The purpose is to compare a list of protein accession from a text file, to all proteins contained into a 
  
 ===== Access ===== ===== Access =====
  
 +{{ :​how_to:​compareexternallistmenu.png|}}
 +
 +  - **Select a context** (Search context or grouped User context)
 +  - **Right-click and select ''​Algorithms->​Compare with->An external accession list''​ menu**
 +  - **Select the text file that contains the accession list**. The first column is used. If several columns exist, it is assumed that fields are comma separated. ​
 +  - **Select the result file to write**
 +
 +**__How to format your text file with accession numbers__**:​
 +
 +{{:​how_to:​compareexternallistexplanation.png|}}
 +
 +===== View result =====
  
 +The comparing result file contains the following information:​\\
 +{{:​how_to:​compareexternallistresult.png|}}
how_to/comparecontextwithextaccession.1288267199.txt.gz · Last modified: 2010/10/28 13:59 by 132.168.74.230