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how_to:comparecontextwithextaccession [2010/10/28 14:11] 132.168.74.230 |
how_to:comparecontextwithextaccession [2010/10/28 15:10] (current) 132.168.74.230 |
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| ====== How to compare a context with an external accession list ====== | ====== How to compare a context with an external accession list ====== | ||
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| + | The purpose is to compare a list of protein accession from a text file, to all proteins contained into a | ||
| ===== Access ===== | ===== Access ===== | ||
| - | - Select a context | + | {{ :how_to:compareexternallistmenu.png|}} |
| - | - Right-click to display context menu then select ''Algorithms->Compare with->An external accession list'' | + | |
| - | - Select the text file that contains the accession list. The first column is used. If several columns exist, it is assumed that fields are comma separated. | + | |
| - | - Select the result file to write | + | |
| - | {{:how_to:compareexternallistmenu.png|}} | + | - **Select a context** (Search context or grouped User context) |
| - | ===== View result ===== | + | - **Right-click and select ''Algorithms->Compare with->An external accession list'' menu** |
| + | - **Select the text file that contains the accession list**. The first column is used. If several columns exist, it is assumed that fields are comma separated. | ||
| + | - **Select the result file to write** | ||
| + | **__How to format your text file with accession numbers__**: | ||
| + | {{:how_to:compareexternallistexplanation.png|}} | ||
| + | |||
| + | ===== View result ===== | ||
| + | The comparing result file contains the following information:\\ | ||
| + | {{:how_to:compareexternallistresult.png|}} | ||