Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 232 lcl|NC_020873.1_cdsid_YP_007677130.1 HHsearch (proba=100.00%)
Portal 235 lcl|NC_020873.1_cdsid_YP_007677133.1 HHsearch (proba=100.00%)
TermL 10 lcl|NC_020873.1_cdsid_YP_007676908.1 Blast (e-value=0)
MTP 224 lcl|NC_020873.1_cdsid_YP_007677122.1 Blast (e-value=5e-59)
Sheath 225 lcl|NC_020873.1_cdsid_YP_007677123.1 HHsearch (proba=100.00%)
Ad1 230 lcl|NC_020873.1_cdsid_YP_007677128.1 HHsearch (proba=97.82%)
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:63741
protein:vir:80491
protein:vir:80835
P100
A511
phiEF24C
58 %
58 %
57 %
Portal protein:vir:80644
protein:vir:63755
protein:vir:80796
A511
P100
phiEF24C
52 %
52 %
50 %
TermL protein:vir:80755
protein:vir:99333
protein:vir:95547
phiEF24C
K
G1
55 %
54 %
54 %
MTP protein:vir:80620
protein:vir:63764
protein:vir:80710
A511
P100
phiEF24C
71 %
68 %
67 %
Sheath protein:vir:80779
protein:vir:80488
protein:vir:63742
phiEF24C
A511
P100
47 %
47 %
47 %
Ad1 protein:vir:80320
protein:vir:1435
protein:vir:8104
phi644-2
phiE125
Che9c
15 %
16 %
11 %