Virfam_CNT_analysis

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : A511 | Genbank acc : NC_009811 | Aclame index mge :1883

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 190

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	17	lcl\|Aclame:protein:vir:80491\|NCBI_annot:Cps\|genbank:acc:YP_001468466;genbank:gi:157325041;genbank:Ge	HHsearch (proba=100.00%)
Portal	14	lcl\|Aclame:protein:vir:80644\|NCBI_annot:gp23\|genbank:acc:YP_001468463;genbank:gi:157325038;genbank:G	HHsearch (proba=100.00%)
TermL	5	lcl\|Aclame:protein:vir:80633\|NCBI_annot:gp14\|genbank:acc:YP_001468454;genbank:gi:157325029;genbank:G	Blast (e-value=0)
MTP	25	lcl\|Aclame:protein:vir:80620\|NCBI_annot:gp8\|genbank:acc:YP_001468474;genbank:gi:157325049;genbank:Ge	Blast (e-value=1e-79)
Sheath	24	lcl\|Aclame:protein:vir:80488\|NCBI_annot:Tsh\|genbank:acc:YP_001468473;genbank:gi:157325048;genbank:Ge	HHsearch (proba=100.00%)
Ad1	19	lcl\|Aclame:protein:vir:80621\|NCBI_annot:gp3\|genbank:acc:YP_001468468;genbank:gi:157325043;genbank:Ge	HHsearch (proba=98.20%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:80491 protein:vir:63741 protein:vir:80835	A511 P100 phiEF24C	100 % 100 % 73 %
Portal	protein:vir:80644 protein:vir:63755 protein:vir:80796	A511 P100 phiEF24C	100 % 100 % 63 %
TermL	protein:vir:80633 protein:vir:63747 protein:vir:80755	A511 P100 phiEF24C	100 % 100 % 60 %
MTP	protein:vir:80620 protein:vir:63764 protein:vir:80710	A511 P100 phiEF24C	100 % 100 % 75 %
Sheath	protein:vir:80488 protein:vir:63742 protein:vir:80779	A511 P100 phiEF24C	100 % 100 % 65 %
Ad1	protein:vir:80320 protein:vir:1435 protein:vir:8104	phi644-2 phiE125 Che9c	16 % 17 % 11 %