Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 77 lcl|NC_020871.1_cdsid_YP_007676745.1 HHsearch (proba=100.00%)
Portal 74 lcl|NC_020871.1_cdsid_YP_007676742.1 HHsearch (proba=100.00%)
TermL 65 lcl|NC_020871.1_cdsid_YP_007676733.1 Blast (e-value=0)
MTP 85 lcl|NC_020871.1_cdsid_YP_007676753.1 Blast (e-value=1e-79)
Sheath 84 lcl|NC_020871.1_cdsid_YP_007676752.1 HHsearch (proba=100.00%)
Ad1 79 lcl|NC_020871.1_cdsid_YP_007676747.1 HHsearch (proba=97.91%)
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:80491
protein:vir:63741
protein:vir:80835
A511
P100
phiEF24C
100 %
100 %
72 %
Portal protein:vir:80644
protein:vir:63755
protein:vir:80796
A511
P100
phiEF24C
99 %
99 %
63 %
TermL protein:vir:80633
protein:vir:63747
protein:vir:80755
A511
P100
phiEF24C
100 %
100 %
60 %
MTP protein:vir:80620
protein:vir:63764
protein:vir:80710
A511
P100
phiEF24C
100 %
100 %
75 %
Sheath protein:vir:80488
protein:vir:63742
protein:vir:80779
A511
P100
phiEF24C
99 %
99 %
65 %
Ad1 protein:vir:80320
protein:vir:1435
protein:vir:8104
phi644-2
phiE125
Che9c
16 %
16 %
11 %