Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 4 lcl|Aclame:protein:vir:78350|NCBI_annot:Cps|genbank:acc:YP_001468644;genbank:gi:157325222;genbank:Ge HHsearch (proba=100.00%)
Portal 2 lcl|Aclame:protein:vir:78310|NCBI_annot:gp3|genbank:acc:YP_001468642;genbank:gi:157325220;genbank:Ge HHsearch (proba=100.00%)
TermL 1 lcl|Aclame:protein:vir:78311|NCBI_annot:putative Blast (e-value=0)
MTP 10 lcl|Aclame:protein:vir:78324|NCBI_annot:Tsh|genbank:acc:YP_001468650;genbank:gi:157325228;genbank:Ge Blast (e-value=1e-111)
Sheath NOT FOUND
Ad1 6 lcl|Aclame:protein:vir:78326|NCBI_annot:gp7|genbank:acc:YP_001468646;genbank:gi:157325224;genbank:Ge HHsearch (proba=100.00%)
Hc1 7 lcl|Aclame:protein:vir:78327|NCBI_annot:gp8|genbank:acc:YP_001468647;genbank:gi:157325226;genbank:Ge HHsearch (proba=100.00%)
Ne1 8 lcl|Aclame:protein:vir:78335|NCBI_annot:gp9|genbank:acc:YP_001468648;genbank:gi:157325225;genbank:Ge HHsearch (proba=100.00%)
Tc1 9 lcl|Aclame:protein:vir:78349|NCBI_annot:gp10|genbank:acc:YP_001468649;genbank:gi:157325227;genbank:G HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:78350
protein:vir:100632
protein:vir:101291
B025
77
phiNM3
100 %
58 %
57 %
Portal protein:vir:78310
protein:vir:101289
protein:vir:100650
B025
phiNM3
77
100 %
48 %
48 %
TermL protein:vir:78311
protein:vir:100634
protein:vir:101288
B025
77
phiNM3
100 %
58 %
57 %
MTP protein:vir:78324
protein:vir:78634
protein:vir:96971
B025
tp310-2
42e
100 %
31 %
31 %
Ad1 protein:vir:78326
protein:vir:101300
protein:vir:100669
B025
phiNM3
77
100 %
43 %
43 %
Hc1 protein:vir:78327
protein:vir:95995
protein:vir:101301
B025
2638A
phiNM3
100 %
38 %
38 %
Ne1 protein:vir:78335
protein:vir:78644
protein:vir:96973
B025
tp310-2
42e
100 %
47 %
47 %
Tc1 protein:vir:78349
protein:vir:78648
protein:vir:96972
B025
tp310-2
42e
100 %
33 %
33 %