Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 10 lcl|Aclame:protein:vir:94933|NCBI_annot:putative HHsearch (proba=100.00%)
Portal 8 lcl|Aclame:protein:vir:94956|NCBI_annot:putative HHsearch (proba=100.00%)
TermL 7 lcl|Aclame:protein:vir:94970|NCBI_annot:putative Blast (e-value=0)
MTP 16 lcl|Aclame:protein:vir:94939|NCBI_annot:possible Blast (e-value=5e-08)
Sheath NOT FOUND
Ad1 12 lcl|Aclame:protein:vir:94955|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Hc1 13 lcl|Aclame:protein:vir:94910|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Ne1 14 lcl|Aclame:protein:vir:94944|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Tc1 15 lcl|Aclame:protein:vir:94921|NCBI_annot:possible HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:94933
protein:vir:97255
protein:vir:5739
Xp15
M6
PY54
100 %
59 %
18 %
Portal protein:vir:94956
protein:vir:95149
protein:vir:80453
Xp15
PA73
BcepGomr
100 %
26 %
24 %
TermL protein:vir:94970
protein:vir:95130
protein:vir:97250
Xp15
PA73
M6
100 %
30 %
30 %
MTP protein:vir:78378
protein:vir:80398
protein:vir:97240
SETP3
BcepGomr
M6
23 %
17 %
17 %
Ad1 protein:vir:94955
protein:vir:97267
protein:vir:95176
Xp15
M6
PA73
100 %
25 %
22 %
Hc1 protein:vir:94910
protein:vir:97237
Xp15
M6
100 %
16 %
Ne1 protein:vir:94944
protein:vir:78380
protein:vir:94994
Xp15
SETP3
KS7
100 %
29 %
27 %
Tc1 protein:vir:94921
protein:vir:95155
protein:vir:80429
Xp15
PA73
BcepGomr
100 %
30 %
26 %