Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 35 lcl|Aclame:protein:vir:7409|NCBI_annot:major HHsearch (proba=100.00%)
Portal 33 lcl|Aclame:protein:vir:7407|NCBI_annot:putative HHsearch (proba=100.00%)
TermL 31 lcl|Aclame:protein:vir:7405|NCBI_annot:putative Blast (e-value=0)
MTP 40 lcl|Aclame:protein:vir:7414|NCBI_annot:major Blast (e-value=1e-111)
Sheath NOT FOUND
Ad1 36 lcl|Aclame:protein:vir:7410|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Hc1 37 lcl|Aclame:protein:vir:7411|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Ne1 38 lcl|Aclame:protein:vir:7412|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Tc1 39 lcl|Aclame:protein:vir:7413|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:7409
protein:vir:3991
protein:vir:1025
P335
BK5-T
bIL286
100 %
97 %
96 %
Portal protein:vir:3989
protein:vir:7407
protein:vir:1023
BK5-T
P335
bIL286
100 %
100 %
100 %
TermL protein:vir:7405
protein:vir:3986
protein:vir:1021
P335
BK5-T
bIL286
100 %
73 %
73 %
MTP protein:vir:7414
protein:vir:3996
protein:vir:1030
P335
BK5-T
bIL286
100 %
99 %
99 %
Ad1 protein:vir:7410
protein:vir:1026
protein:vir:3992
P335
bIL286
BK5-T
100 %
98 %
94 %
Hc1 protein:vir:7411
protein:vir:3993
protein:vir:1027
P335
BK5-T
bIL286
100 %
97 %
97 %
Ne1 protein:vir:7412
protein:vir:3994
protein:vir:1028
P335
BK5-T
bIL286
100 %
96 %
93 %
Tc1 protein:vir:7413
protein:vir:1029
protein:vir:3995
P335
bIL286
BK5-T
100 %
98 %
95 %