To display data of a Search Result:

- right click on a Search Result

- click on the menu “Search Result >” and on the sub-menu “PSM” or “Proteins”

If you click on PSM sub-menu, you obtain this window:

Upper View: list of all PSM/Peptides.

Middle View: Spectrum, Spectrum Error and Fragmentation Table of the selected PSM. If no annotation is displayed, you can generate Spectrum Matches by clicking on the according button

Bottom Window: list of all Proteins containing the currently selected Peptide.

Note : Abbreviations used are listed here

If you click on Proteins sub-menu, you obtain this window:

Upper View : list of all Proteins

Bottom View : list of all Peptides of the selected Protein.

Note : Abbreviations used are listed here