To display data of an Identification Summary:

- right click on an Identification Summary

- click on the menu “Identification Summary >” and on the sub-menu “PSM”, “Peptides” or “Protein Sets”

If you click on PSM sub-menu, you obtain this window:

Note : Abbreviations used are listed here

If you click on Peptides sub-menu, you obtain this window:

Upper View : list of all Peptides

Middle View : list of all Protein Sets containing the selected peptide.

Bottom Left View : list of all Proteins of the selected Protein Set

Bottom Right View : list of all Peptides of the selected Protein

Note : Abbreviations used are listed here

If you click on Protein Sets sub-menu, you obtain this window:

View 1 (at the top) : list of all Protein Sets

Note : In the column Proteins, 4 (4,0) means that there are 4 proteins in the Protein Set. 4 in the sameset, 0 in the subset.

View 2 : list of all Proteins of the selected Protein Set.

View 3 : list of all Peptides of the selected Protein

View 4 : Protein Sequence of the previously selected Protein and Spectrum of the selected Peptide.

Note : Abbreviations used are listed here