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setupguide:upgrade2v1_2 [2016/02/04 16:15]
132.168.72.225 créée
setupguide:upgrade2v1_2 [2016/07/07 14:01] (current)
132.168.72.225
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 ====== Upgrading the Proline Suite ====== ====== Upgrading the Proline Suite ======
  
-__**From Version ​1_1 to Version ​1_2**:__+__**From Version ​1.1 to Version ​1.2 and from Version 1.2 to Version 1.3**:__
  
 ===== Updating the Datastore ===== ===== Updating the Datastore =====
Line 11: Line 11:
 ==== from Windows installer ==== ==== from Windows installer ====
  
-You will first need to uninstall previous server. This will not remove previous data stored in Proline DataStore nor it will remove configuration files !+You will first need to uninstall previous server. This will not remove previous data stored in Proline DataStore nor will it remove configuration files! 
 + 
 +You then have to do a fresh install using the same folder as previous installation. (see [[setupguide:​firstinstallserverinstaller]]) 
 + 
 + 
 +==== Using archive files ==== 
 + 
 +Extract Proline WebCore zip file (packaged into ProlineServer archive) to the location of your choice, use a different location than previous installation.  
 + 
 + 
 +__Configuration files__ \\ 
 + 
 +Before running the server, you first need to modify ProlineWeb-Core configuration. Configuration files are located at ''<​your_folder>​\ProlineWeb-Core-x.y.z\Proline\WEB-INF\classes''​.  
 + 
 +The configuration files didn't change. You can just copy theses files from your previous ProlineWeb-Core to the new one.  
 + 
 +To use the XIC Quantitation process, you should also configure the mzDB files  **''​mount_points''​** entry. See first installation documentation for more details.  
 + 
 + 
 + 
 +__Runner__ \\ 
 +You can upgrade the amount of memory used by the server in the jetty-runner.bat /​jetty-runner.sh file. If the server is configured with large amount of memory, it is recommended to increase this value.  
 +Change the value of -Xmx option: Xmx4g ⇒ -Xmx8g to upgrade from 4 GB (defaults) to 8GB.  
 + 
 + 
 +Run ''​jetty-runner.bat''​ (or jetty-runner.sh on linux system) to start the jetty server. You should now be able to access ProlineWeb-Core by typing ​  ​[[http://​localhost:​8080/​proline]] or [[http://<​hostname>:​8080/​proline]] in your favorite browser. The following message must appear:  
 + 
 +<​code>​ 
 +ProlineWeb-Core working ! 
 + 
 +Number of IVersion services : <X> 
 +fr.proline.core.wsl.Version Module: ProlineWeb-Core Version: <​XXX>​ 
 +fr.proline.module.parser.omssa.Version Module: PM-OmssaParser Version: <​YYY>​ 
 +fr.proline.module.parser.mascot.Version Module: PM-MascotParser Version:<​XYZ>​ 
 +fr.proline.admin.Version Module: Proline-Admin Version: <​ZYW>​ 
 +fr.proline.util.ScalaVersion Module: ProFI-Commons-Scala Version: <​YZX>​ 
 +fr.proline.util.JavaVersion Module: ProFI-Commons-Java Version: <​YXZ>​ 
 +fr.proline.core.service.Version Module: Proline-OMP Version: <​WYZ>​ 
 +</​code>​
  
-EN COURS 
  
 ===== Updating Sequence Repository ===== ===== Updating Sequence Repository =====
  
-There is no upgrade procedure for this module. You should do a fresh install, see [[setupguide:​seqrepoinstall|installing Sequence Repository]]. As configuration files structure has changed, you CAN NOT copy/paste them to this new installation. Nevertheless,​ you can copy the previous rules in the appropriate properties of the new files.+There is no upgrade procedure for this module. You should do a fresh install, see [[setupguide:​seqrepoinstall|installing Sequence Repository]]. ​ 
 + 
 +__From Version 1.1 to 1.2__: ​As configuration files structure has changed, you CAN NOT copy/paste them to this new installation. Nevertheless,​ you can copy the previous rules in the appropriate properties of the new files.
  
 +__From Version 1.2 to 1.3__: ​ Configuration files have not been modified. You CAN copy/paste them to this new installation from previous version (1.2 !) .
  
 ===== Upgrading Proline Studio =====  ===== Upgrading Proline Studio ===== 
setupguide/upgrade2v1_2.1454598930.txt.gz · Last modified: 2016/02/04 16:15 by 132.168.72.225