setupguide:upgrade
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision | ||
|
setupguide:upgrade [2015/07/27 10:47] 193.48.0.3 |
setupguide:upgrade [2016/07/07 10:03] (current) 132.168.72.225 [From graphical interface ProlineAdmin GUI] |
||
|---|---|---|---|
| Line 26: | Line 26: | ||
| ==== From graphical interface ProlineAdmin GUI ==== | ==== From graphical interface ProlineAdmin GUI ==== | ||
| - | Once you have editted your configuration file, click the "Upgrade databases" button. | + | Open the graphical interface by running ''start.bat'' (or ''start.sh'' on linux system). |
| + | If you used the Windows installer, a shortcut "Proline Admin" is available in the Windows Start Menu, under the Proline folder. | ||
| - | **Note:** This functionnality will be disable if Proline is not set up (see how to [[setupguide:firstinstall|set up Proline]]). | + | If you don't have a valid configuration file, you can change it or edit it (see [[setupguide:setup_with_prolineadmin_gui|how to]]). |
| - | {{ :setupguide:upgrade_dbs2.png?nolink&800 |}} | + | |
| + | Click the button named //Upgrade Proline databases//. | ||
| + | |||
| + | **Note:** This functionnality will be disable if the configuration is invalid or if Proline is not set up (see how to [[setupguide:start#installing_upgrading_the_proline_suite|configure and set up Proline]], or [[setupguide:setup_with_prolineadmin_gui#setup with prolineadmin gui|using ProlineAdmin GUI]]) | ||
| + | |||
| + | {{ :setupguide:upgrade_proline_databases.png?nolink&800 |}} | ||
| ==== ==== | ==== ==== | ||
| - | Wait until this operation is finished, it may be relatively long if lots of result files import with spectral matches have been done ! | + | Wait until this operation is finished, it may be relatively long if lots of result files with spectral matches have been imported ! |
| + | ---- | ||
| ===== Installing, upgrading & running Proline WebCore ===== | ===== Installing, upgrading & running Proline WebCore ===== | ||
| Line 49: | Line 57: | ||
| Result identification files (Mascot dat, OMSSA or X!Tandem) as well as mzDB files (for the XIC Quantitation process) are only browsed from Proline Server side. | Result identification files (Mascot dat, OMSSA or X!Tandem) as well as mzDB files (for the XIC Quantitation process) are only browsed from Proline Server side. | ||
| - | Administrator must configure the target directory/ies in the entry ''mount_points'' in the ''application.conf'' file | + | |
| + | Administrator must configure the target directory(ies) in the entry ''mount_points'' in the ''application.conf'' file by editing the file manually or [[setupguide:setup_with_prolineadmin_gui#Configure the mount-points|using ProlineAdmin GUI]]. | ||
| Mascot dat or OMSSA path should be configured in ''result_files'' sub-entry, administrator can add one or more mappings as ''label = "<absolute/directory/path>"''. | Mascot dat or OMSSA path should be configured in ''result_files'' sub-entry, administrator can add one or more mappings as ''label = "<absolute/directory/path>"''. | ||
| Line 91: | Line 100: | ||
| fr.proline.core.service.Version Module: Proline-OMP Version: <WYZ> | fr.proline.core.service.Version Module: Proline-OMP Version: <WYZ> | ||
| </code> | </code> | ||
| + | |||
| + | ---- | ||
| ===== Account update ===== | ===== Account update ===== | ||
| Line 96: | Line 107: | ||
| In previous version, there were a common logging between Proline Web and Prolibe Server but different passwords. We changed this behaviour, so after you upgrade your proline server, your password will be reset to 'proline'. You can change this from Proline Studio ([[how_to:studio:connectionmgmt|Connection Managment | In previous version, there were a common logging between Proline Web and Prolibe Server but different passwords. We changed this behaviour, so after you upgrade your proline server, your password will be reset to 'proline'. You can change this from Proline Studio ([[how_to:studio:connectionmgmt|Connection Managment | ||
| page]]) or Proline Web | page]]) or Proline Web | ||
| + | |||
| + | ---- | ||
| ===== Installing Sequence Reposiroty ===== | ===== Installing Sequence Reposiroty ===== | ||
| Line 157: | Line 170: | ||
| For other fasta file the protein accssion will be extract by using string before first blank. | For other fasta file the protein accssion will be extract by using string before first blank. | ||
| + | |||
| + | ---- | ||
| ===== Upgrading Proline Studio ===== | ===== Upgrading Proline Studio ===== | ||
| Line 162: | Line 177: | ||
| * Proline Studio application distribution is a zip file that must be unzip on each client PC. You should unzip it under a different folder than previous version | * Proline Studio application distribution is a zip file that must be unzip on each client PC. You should unzip it under a different folder than previous version | ||
| - | + | ---- | |
| ===== Upgrading and configuring Proline Web Desktop ===== | ===== Upgrading and configuring Proline Web Desktop ===== | ||
| + | //TODO | ||
setupguide/upgrade.1437986825.txt.gz · Last modified: 2015/07/27 10:47 by 193.48.0.3
Page Tools
Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
