prolineconcepts:rs_rsm
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| - | ====== Search Result and Identification Summary ====== | ||
| - | A **Search Result** (aka [[:msidb_documentation#result_set|ResultSet]] in the database schema) is the raw interpretation of a given set of MS/MS spectra given by a search engine or a denovo interpretation process. The content of a **Search Result** is one or many peptides matching to the submitted MSMS spectrum (**PSM**), each peptide being issued from protein sequences. The Search Result also contains additional information such as search parameters, used data-bank, etc. A **Search Result** is created when a [[prolineconcepts:resultfile|]] (Mascot ''.dat'' file or an OMSSA ''.omx'') file is imported in Proline, in the case of a target-decoy search, two **Search Results** are created : one for the target PSM, one for decoy PSM. | ||
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| - | An **Identification Summary** (aka [[:msidb_documentation#result_summary|ResultSummary]]) is a set of identified proteins inferred from a subset of the PSM contained in the *Search Result*. The subset of PSM taken into account are the PSM that have been validated a filtering process (example: PSM fulfilling some specified criteria such as score greater than a threshold value). | ||
prolineconcepts/rs_rsm.1380117548.txt.gz · Last modified: 2013/09/25 15:59 by 132.168.72.53
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