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prolineconcepts:protscoring [2014/01/24 12:12] 132.168.72.206 |
prolineconcepts:protscoring [2015/07/10 15:21] (current) 132.168.72.225 [Proteins and Proteins sets scoring] |
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====== Proteins and Proteins sets scoring ====== | ====== Proteins and Proteins sets scoring ====== | ||
- | There are multiple algorithms than could be use to calculate the Proteins and Protein Sets score. | + | There are multiple algorithms than could be used to calculate the Proteins and Protein Sets score. |
- | Proteins score are computed during the importation phase while Protein Sets score are comptued during the validation phase. | + | Proteins score are computed during the importation phase while Protein Sets score are computed during the validation phase. |
===== Protein ===== | ===== Protein ===== | ||
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* importing Mascot result file : the Mascot standard scoring is used (sum of peptide matches scores) | * importing Mascot result file : the Mascot standard scoring is used (sum of peptide matches scores) | ||
* importing OMSSA result file : FIXME | * importing OMSSA result file : FIXME | ||
+ | * importing X! tandem result file : the X! Tandem standard hyperscore is used | ||
===== Protein Set ===== | ===== Protein Set ===== |