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--- how_to:studio:viewxic [2015/10/28 15:57]
132.168.72.237 [Display a XIC]
+++ how_to:studio:viewxic [2015/12/15 10:58] (current)
132.168.72.206
@@ Line 14: / Line 14: @@
 {{:how_to:studio:xic_display_proteinset.png?700|}}
-The overview is based on the abundances values.
+The overview is based by default on the abundances values.
+(Note: if you sort on the overview column, the sort is based on max(value-mean(values))/mean(values).
+So, you will obtain the most homogenous and confident rows first)
 For each quantitation channel, are displayed:
@@ Line 76: / Line 78: @@
 {{:how_to:studio:xic_display_peptideions.png?|}}
-==== Display Experimental Design ====
+==== Display Experimental Design and Parameters  ====
+By clicking on "Exp. Design > Parameters", you can see the experimental design and the parameters of the selected XIC.
+{{:how_to:studio:displayxicdesign.png|}}
+{{:how_to:studio:displayxicparam.png|}}
+If you have launched the refinement of the protein sets abundances on the XIC, you can also display the refinement parameters.
+==== Display Map Alignment ====
+By clicking on "Exp. Design > Map Alignment", you can see the map of the variation of the alignement of the maps compared to the map alignment of the selected XIC. You can also calculate the predicted time in a map from an elution time in another map.
+{{:how_to:studio:displaymapalignment.png|}}
-By clicking on "Experimental Design", you can see the experimental design and the parameters of the selected XIC.
-{{:how_to:studio:xic_exp_design.png|}}

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