how_to:studio:mzscope
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| Both sides previous revision Previous revision Next revision | Previous revision | ||
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how_to:studio:mzscope [2015/04/03 14:02] 132.168.72.237 [Scan] |
how_to:studio:mzscope [2015/04/09 09:27] (current) 132.168.72.237 [Peakels] |
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| ==== TIC or BPI chromatogram ==== | ==== TIC or BPI chromatogram ==== | ||
| By default, the TIC chromatogram is displayed. You can click on "BPI" to see the best peak intensity graph. | By default, the TIC chromatogram is displayed. You can click on "BPI" to see the best peak intensity graph. | ||
| - | The "Extract" button allows you to extract a chromatogram on a specified mass. | + | |
| By clicking in the graph, you can see below the scan at the selected time. | By clicking in the graph, you can see below the scan at the selected time. | ||
| {{:how_to:studio:mzscope.png?|}} | {{:how_to:studio:mzscope.png?|}} | ||
| Line 16: | Line 16: | ||
| {{:how_to:studio:mzscopemultifile.png?|}} | {{:how_to:studio:mzscopemultifile.png?|}} | ||
| + | You can extract a chromatogram at a given mass by entering the specified value in the panel above. | ||
| ==== Scan ==== | ==== Scan ==== | ||
| + | |||
| + | {{:how_to:studio:mzscopescan.png?|}} | ||
| You can navigate through the scans | You can navigate through the scans | ||
| Line 24: | Line 27: | ||
| - by entering a retention time | - by entering a retention time | ||
| + | - by clicking the keys arrows on the keyboard (Ctrl+Arrows to keep the same ms level) | ||
| + | |||
| + | By double clicking on the scan, the corresponding chromatogram will be displayed above (The Alt key or the check box "XIC overlay" allows you to overlay the chromatograms in the same graph). | ||
| - | [...//to be completed//...] | + | {{:how_to:studio:mzscopechromato.png?|}} |
| ==== Peakels ==== | ==== Peakels ==== | ||
| Line 32: | Line 38: | ||
| {{:how_to:studio:mzscope_detectpeakels_menu.png?|}} | {{:how_to:studio:mzscope_detectpeakels_menu.png?|}} | ||
| - | A dialog allows you to choose the parameters of the peakels detection: the tolerance and eventually a range of m/z: | + | A dialog allows you to choose the parameters of the peakels detection: the tolerance and eventually a range of m/z, or a m/z value: |
| {{:how_to:studio:detectpeakelsparam.png?|}} | {{:how_to:studio:detectpeakelsparam.png?|}} | ||
how_to/studio/mzscope.1428062576.txt.gz · Last modified: 2015/04/03 14:02 by 132.168.72.237
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