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IRMa stands for Interprétation des Résultats Mascot® (Mascot® Results Interpretation).
Download is available at the following FTP site : ftp://ftp.cea.fr/pub/edyp/irma
References :
Veronique Dupierris; Christophe Masselon; Magali Court; Sylvie Kieffer-Jaquinod; Christophe Bruley
A toolbox for Validation of mass spectrometry peptides identification and Generation of database: IRMa
Bioinformatics 2009; doi: 10.1093/bioinformatics/btp301
IRMa toolbox provides an interactive application to assist in the validation of Mascot® search results. IRMa reads MASCOT® result (using Matrix Science® Parser distributed free of charge) and automatically filters identified peptides. All relevant information is displayed in a structured manner, showing “proteins hits” details. User can then manually or automatically confirm or reject individual peptide spectrum matches.
Screenshots available here.
Read our quick start guide.
The installation guide gives informations on the distribution content.
IRMa can be used in three different ways :
But what ever mode you use, the IRMa principles is the entry point to understand this toolbox.
Validated identification results can be exported within a relational database. These database must implements the Mass Spectrometry Identification database models.
Legend :
release date : IRMa version number (DB model version compatibility)
19/10/2010 : IRMa 1.27.3 (D.3 & D.4)
11/10/2010 : IRMa 1.27.2 (D.3 & D.4)
30/07/2010 : IRMa 1.27.1 (D.3 & D.4)
24/09/2010 : IRMa 1.27.0 (D.3 & D.4)
27/07/2010 : IRMa 1.26.1 (D.3)
20/07/2010 : IRMa 1.26.0 (D.3)
25/06/2010 : IRMa 1.25.0 (D.3)
10/05/2010 : IRMa 1.24.2 (D.3)
06/05/2010 : IRMa 1.24.1 (D.3)
15/04/2010 : IRMa 1.24.0 (D.3)
01/12/2009 : IRMa 1.23.2 (D.2)
13/01/2010 : IRMa 1.23.1 (D.2)
01/12/2009 : IRMa 1.23.0 (D.2)
18/09/2009 : IRMa 1.22.2 (D.2)
28/04/2009 : IRMa 1.22.0 (D.2)
05/03/2009 : IRMa 1.21.0 (D.1)
09/10/2008 : IRMa 1.20.1