User Tools

Site Tools


userguide:pride_converter

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
userguide:pride_converter [2011/03/04 13:47]
132.168.74.230
userguide:pride_converter [2011/03/04 18:17] (current)
132.168.74.230
Line 12: Line 12:
 ===== Generate a PRIDE XML file from a Mascot DAT File ===== ===== Generate a PRIDE XML file from a Mascot DAT File =====
  
-:​!:​**Warning:** +:​!:​**Warning**:!: 
-  * **The purpose here is to create ​a PRIDE XML file from which we will only extract the header ​part (information about contact, experiment, sample, protocol, etc.). So, steps concerning the data itself (spectra selection, peptide and protein identification,​ etc.) are not described here.**+  * **The purpose here is to __create ​a PRIDE XML file from which we will only extract the header ​part__ ​(information about contact, experiment, sample, protocol, etc.). So, steps concerning the data itself (spectra selection, peptide and protein identification,​ etc.) are not described here.**
  
  
-:!:**Tips:** +:!:**Tips**:!: 
  
   * PRIDE Converter help is accessible from each panel of the wizard   * PRIDE Converter help is accessible from each panel of the wizard
Line 126: Line 126:
 A file ''​mascotDatFile_MyLabel_to_PRIDE_YYYYMMDD_123456.xml.gz''​ is created in your ouput folder (where ''​myLabel''​ is the label you specified in Step 3).\\ A file ''​mascotDatFile_MyLabel_to_PRIDE_YYYYMMDD_123456.xml.gz''​ is created in your ouput folder (where ''​myLabel''​ is the label you specified in Step 3).\\
 Uncompress the file to obtain the ''​mascotDatFile_MyLabel_to_PRIDE_YYYYMMDD_123456.xml''​ file. Uncompress the file to obtain the ''​mascotDatFile_MyLabel_to_PRIDE_YYYYMMDD_123456.xml''​ file.
 +
userguide/pride_converter.1299242846.txt.gz · Last modified: 2011/03/04 13:47 by 132.168.74.230