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userguide:contextdefinition [2009/12/16 14:37]
132.168.74.230
userguide:contextdefinition [2009/12/16 14:48]
132.168.74.230
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 There are two types of contexts in hEIDI: There are two types of contexts in hEIDI:
   * Search context: each identification result from Mascot, or from any other identification engine, is automatically "​encapsulated"​ into one Search context.   * Search context: each identification result from Mascot, or from any other identification engine, is automatically "​encapsulated"​ into one Search context.
-  * User context: it is created by the user in order to gather together several identification results into a User context. In order to have non-redundant sets of proteins for a given context, proteins need to be grouped to generate ​"​Protein Groups"​.+  * User context: it is created by the user in order to gather together several identification results into a User context. In order to have non-redundant sets of proteins for a given context, proteins need to be grouped to build "​Protein Groups"​.
  
-===== GUI: context ​tree view =====+===== Context ​tree view =====
  
 {{:​usercontextshierarchy.png |}} {{:​usercontextshierarchy.png |}}
 A User context is represented by {{:​usercontext.png|}}.\\ A User context is represented by {{:​usercontext.png|}}.\\
-A context ​have either child contexts or identifications but can't have both at the same level.\\ +User context ​contains ​either child contexts or identifications but can't have both at the same level.\\ 
-There are different ​reasons for grouping several ​identifications ​under same context:\\+ 
 +There are multiple ​reasons for grouping several ​identifcations ​under the same User context:
   * Same biological origin   * Same biological origin
   * Same gel   * Same gel
userguide/contextdefinition.txt · Last modified: 2010/01/05 12:11 by 132.168.74.230