This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision Last revision Both sides next revision | ||
how_to:proteingrouping [2011/07/22 15:19] 132.168.73.124 |
how_to:proteingrouping [2012/01/23 14:28] 132.168.72.130 |
||
---|---|---|---|
Line 2: | Line 2: | ||
Grouping is automatically saved to MSIdb. | Grouping is automatically saved to MSIdb. | ||
- | For more information on protein grouping, see [[userguide:proteingroups|here]]. | + | For more information on protein grouping, see [[userguide:peptidesandproteingrouping|here]]. |
=== Load menu === | === Load menu === | ||
{{:proteingroupingaction.png |Execute protein grouping}} | {{:proteingroupingaction.png |Execute protein grouping}} | ||
- | - Right-click on the context node of your choice in the MSIExplorer view to display context sensitive menu and select "Algorithms->Group proteins..." | + | - Right-click one ore more context nodes of your choice in the MSIExplorer view to display context sensitive menu and select "Algorithms->Group proteins..." |
- If needed, change settings for protein grouping (see explanations below), and ''Ok'' | - If needed, change settings for protein grouping (see explanations below), and ''Ok'' | ||
- When grouping process is finished, the color of the context name change to red in the MSIExplorer view. | - When grouping process is finished, the color of the context name change to red in the MSIExplorer view. | ||
Line 14: | Line 14: | ||
=== Parameters === | === Parameters === | ||
- | {{:proteingroupingparam.png|Parameters for protein grouping}} | + | {{:how_to:protgrouping.png|Parameters for protein grouping}} |
| | ||
**Protein grouping settings:** | **Protein grouping settings:** | ||
Line 27: | Line 27: | ||
| | ||
+ | **Grouping order:** | ||
+ | If you select multiple context to group, the order of grouping will be different as the selection order. Children must be grouped before parents so the order will reflect this rule. | ||