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how_to:proteinfiltering [2010/03/16 11:42]
132.168.73.247
how_to:proteinfiltering [2012/01/23 14:50] (current)
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 ====== Regular Expression filter ====== ====== Regular Expression filter ======
 +
 +This filter is the same as the one used to select new typical protein (see [[how_to:​changetypicalprotein|change typical protein)]] but only one rule composition could be specified. ​
 +
 +{{:​how_to:​regexpfilter.png|}}
  
 ====== Peptide Count filter ====== ====== Peptide Count filter ======
  
 +This filter allow user to mask protein group which 
 +  -  have less than x peptides (as grouped by hEIDI) or less than x peptides with different sequences (without taking into account the peptide mass) depending on the user choice.
 +  - optionally, the peptide score option could be specified to retain protein having less than x peptides but each of them having a score higher than specified one.
 +
 +
 +{{:​how_to:​peptidecountfilter.png|}}
  
 +====== Occurrence in child contexts ======
  
 +This filter allow user to mask protein that are not seen in at least ''​X''​ child context. This filter could only be used on context which groups at\\
 +{{:​how_to:​childoccurencefilter.png|}}
how_to/proteinfiltering.1268736143.txt.gz · Last modified: 2010/03/16 11:42 by 132.168.73.247