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How to compare multiple contexts
You can compare :
an existing parent union context with its children,
or several contexts with a *virtual* parent union
Activation conditions: selected contexts must be grouped AND saved to MSIdb.
Compare a context with its children
Select the parent context of your choice
Right-click and select Algorithms > Compare with > All children/Union parent
The comparison window displays the result
Select in the droplist the properties (peptide similarity, protein similarity, accession, etc.) you want to compare
Compare several contexts with a *virtual* parent union
Select the contexts of your choice (at least 2 contexts, may be Search or User contexts)
Right-click and select Algorithms > Compare with > All children/Union parent
The comparison window displays the result
Select in the droplist the characteristics you want to compare