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how_to:alignretentiontime [2010/08/03 14:55]
132.168.74.230
how_to:alignretentiontime [2010/08/04 12:11]
132.168.74.230
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 {{ :​how_to:​rtalignmentmenu.png |Retention Time Alignment menu}} {{ :​how_to:​rtalignmentmenu.png |Retention Time Alignment menu}}
 +
 +:!: **Required conditions to run the Retention Time Alignment algorithm:​**
 +
 +  * **Selected User context must be grouped**
 +
 +If above conditions are respected, then follow these steps:
  
   - Select the User context you want to align (You first need to [[how_to:​proteingrouping|group proteins]] for this context and [[how_to:​savetomsidb|save]] it)   - Select the User context you want to align (You first need to [[how_to:​proteingrouping|group proteins]] for this context and [[how_to:​savetomsidb|save]] it)
   - To display the settings dialog:   - To display the settings dialog:
     * Right-click on the selected context and select ''​Algorithms->​Retention Time->​Retention Time Alignment'' ​     * Right-click on the selected context and select ''​Algorithms->​Retention Time->​Retention Time Alignment'' ​
-    * Or, from the main toolbar, select ''​MS Identifications->​Context->​Algorithms->​Retention Time Alignment''  ​+    * Or, from the main toolbar, select ''​MS Identifications->​Context->​Algorithms->​Retention Time->​Retention Time Alignment''  ​
   - Change algo settings options (see below) if needed and click the ''​Ok''​ button   - Change algo settings options (see below) if needed and click the ''​Ok''​ button
  
how_to/alignretentiontime.txt · Last modified: 2010/08/04 12:11 by 132.168.74.230