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--- how_to:accessspectralcountdata [2010/01/12 07:55]
132.168.73.247
+++ how_to:accessspectralcountdata [2012/02/29 12:24]
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@@ Line 1: / Line 1: @@
 ====== How to run and access spectral count data ======
+:!: Since hEIDI 1.13.0, spectral count has been tuned. To achieve this, the new field ''leaves_match_count'' in MSIdb has been created in the peptide_instance table.
 ===== Run the Spectral Count algorithm =====
 Spectral Count algorithm should have been run at least once :
-  - Select the context of your choice (for which protein grouping have been executed)
+  - Select one or more context of your choice (for which protein grouping have been executed)
   - Right-click and select ''Algorithms > Compute Spectral Count''
   - Check/Uncheck optional parameters to compute. Then ''OK''.
@@ Line 12: / Line 14: @@
 ===== View spectral count data =====
-When Spectral Count algorithm execution is finished, you can retrieve results in:
+When Spectral Count algorithm execution is finished, you can retrieve results and parameters used in:
   * [[accessproperties|properties]] of every Protein Groups in that context
 {{:spectralcountresultpropertysheet.png| Protein Group properties}}

hEIDI