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userguide:start [2011/03/08 12:33] 132.168.74.230 |
userguide:start [2012/02/29 12:28] 132.168.73.124 |
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* Data concepts : | * Data concepts : | ||
* [[contextDefinition|Context definition]] | * [[contextDefinition|Context definition]] | ||
- | * [[proteinGroups|Protein groups and peptides]] | + | * **Changed** :!: [[proteinGroups|Protein groups and peptides]] |
* [[identRunSample|Identifications, Runs and Samples]] | * [[identRunSample|Identifications, Runs and Samples]] | ||
* [[properties|Properties]] | * [[properties|Properties]] | ||
* [[PRIDE Export Properties]] | * [[PRIDE Export Properties]] | ||
* [[PRIDE Converter]] | * [[PRIDE Converter]] | ||
- | * [[PRIDE Inspecter]] | + | * [[PRIDE Inspector]] |
* Operations definitions | * Operations definitions | ||
* [[peptidesAndProteinGrouping|Grouping peptides and proteins]] | * [[peptidesAndProteinGrouping|Grouping peptides and proteins]] | ||
* [[proteinFiltering|Filter proteins [groups] ]] | * [[proteinFiltering|Filter proteins [groups] ]] | ||
- | * [[contextComparisons|Contexts comparison]] | + | * **Changed** :!: [[contextComparisons|Contexts comparison]] |
- | * [[spectralCount|Spectral Count]] | + | * **Changed** :!: [[spectralCount|Spectral Count]] |
* [[retentionTimeAlignment|Retention time alignment]] | * [[retentionTimeAlignment|Retention time alignment]] | ||
- | * [[retentionTimeRecomputing|Retention time recomputing]] | + | * [[retentionTimeRecomputing|Retention time recomputing]] |
- | * [[graphicalPeptideView|Graphical peptides view (histograms, plots....)]] | + | * **New** :!: [[falsePositiveRate|False Positive Rate]] |
+ | * **New** :!: [[umcToMsiDb|UMCs into MSIdb]] | ||