Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 15 lcl|NC_019931.1_cdsid_YP_007237993.1 HHsearch (proba=100.00%)
Portal 18 lcl|NC_019931.1_cdsid_YP_007237996.1 HHsearch (proba=100.00%)
TermL 20 lcl|NC_019931.1_cdsid_YP_007237998.1 Blast (e-value=9e-24)
MTP NOT FOUND
Sheath NOT FOUND
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 12 lcl|NC_019931.1_cdsid_YP_007237990.1 HHsearch (proba=98.57%)
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:93696
protein:vir:104439
protein:vir:10123
Bcep22
86
Stx2 converting bacteriophage II
18 %
16 %
16 %
Portal protein:vir:93630
protein:vir:104437
protein:vir:10117
Bcep22
86
Stx2 converting bacteriophage II
18 %
18 %
18 %
TermL protein:vir:2600
protein:vir:79648
protein:vir:104336
SIO1
TLS
RTP
23 %
22 %
22 %
Ad3 protein:vir:3302
protein:vir:2779
protein:vir:823
933W
Stx2 converting bacteriophage I
VT2-Sa
17 %
17 %
17 %