Proline setupguide

setupguide:firstinstall

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T10:07:19+0200

OBSOLETE Installing the Proline Suite This page is an obsolete help file. Please see following description : Install and set up Proline The Proline suite is based on (different components). The following documentation describes the installation procedure for each of this component: * *

setupguide:firstinstallserverinstaller

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T14:03:43+0200

Proline server installation using Windows installer Download the automated installer from the Proline website (). Warning: Be sure to run the executable file as “administrator” to be able to install third-party dependencies such as PostgreSQL.

setupguide:firstmanualinstallserver

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T14:07:11+0200

Proline server installation using archive files First check that all requirements are first installed on the computer. Then download the zip archive containing Proline components from the dedicated website (). The Proline Server archive file contains three others archives corresponding to the

setupguide:postgresqloptimization

Anonymous (anonymous@undisclosed.example.com) — 2016-06-13T10:38:06+0200

PostgreSQL optimization and authorizations PostgreSQL 9.3.x documentation (English): Main configuration file is postgresql.conf located in PostgreSQL instance data directory. * * PostgreSQL configuration using the graphical interface ProlineAdmin GUI

setupguide:seqrepoinstall

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T14:11:30+0200

Installing and configuring the Sequence Repository Even if this is an optional module it is recommended to install it, mostly if you want to view the proteins sequences in the user interfaces! It can be installed on the same machine running the Proline Server. However as this module will parse the mascot fasta files to extract sequence and description from it, it will be more efficient if installed on the computer executing your Mascot Server. In any case, you should also be able to access to …

setupguide:setup_with_prolineadmin

Anonymous (anonymous@undisclosed.example.com) — 2016-02-04T11:55:14+0200

Setup Proline Suite with Proline-Admin (command-line) You must first configure Proline-Admin since this component is used to create the databases needed by Proline. DataStore Edit the configuration file config/application.conf located in the Proline-Admin folder. Then perform the datastore setup by running the dedicated script.

setupguide:setup_with_prolineadmin_gui

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T14:09:11+0200

Set up Proline Suite with Proline-Admin GUI Note : All the settings shown on the screenshots only stand for examples. You must adapt them to your needs. You must first configure ProlineAdmin since this component is used to create the databases needed by Proline.

setupguide:start

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T14:44:30+0200

Installation & Setup This page gives you a short overview of Proline components architecture and explain how to install and setup the different components Architecture Overview The suite is based on different components (see figure below): * A Relational Database Management System (

setupguide:upgrade

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T10:03:22+0200

Upgrading the Proline Suite From Beta 1 to Beta 2: Updating the Datastore To update the differents Proline Databases, you need to get the appropriated version of ProlineAdmin. ProlineAdmin is released as an archive file, extract this archive in your preferred folder to install this application. You can also use the provided graphical tool, ProlineAdmin

setupguide:upgrade2v1_0

Anonymous (anonymous@undisclosed.example.com) — 2016-06-13T12:58:18+0200

Upgrading the Proline Suite From Beta 2 to Version 1_0: or From Version 1_0 to Version 1_1: Updating the Datastore To update the different Proline Databases, you need to get the appropriate version of ProlineAdmin GUI. ProlineAdmin GUI is released as an archive file (in ProlineServer archive), extract this archive in your preferred folder to install this application. From this tool you can use the command line or the provided graphical tool.

setupguide:upgrade2v1_2

Anonymous (anonymous@undisclosed.example.com) — 2016-07-07T14:01:30+0200

Upgrading the Proline Suite From Version 1.1 to Version 1.2 and from Version 1.2 to Version 1.3: Updating the Datastore No change since version 1.1. No data migration to do. Updating the Server from Windows installer You will first need to uninstall previous server. This will not remove previous data stored in Proline DataStore nor will it remove configuration files!