IRMa

msidb

Anonymous (anonymous@undisclosed.example.com) — 2016-08-24T15:11:15+0200

Mass Spectrometry Identification Database What are MSIdb Mass Spectrometry Identification Database or MSI db, are database containing validated identification data. They are populated using IRMa application and then can be exploited using generic database exploration software or the

userguide:export_db

Anonymous (anonymous@undisclosed.example.com) — 2016-07-25T10:54:02+0200

Database Export Many validated identification results can be exported within a relational database. This feature requires * Postgresql * an existing database For more information on MSI db, see corresponding page Connecting to a database * Disconnect from the database and quit pgAdmin III

instalguide

Anonymous (anonymous@undisclosed.example.com) — 2016-07-25T10:49:58+0200

Installation Guide Back Home This page describe the distribution content and how to run each of the 3 availables modes, after briefly presenting them. Requirements * Java version 1.6 or higher must be installed on your computer and the full path to the

export_result

Anonymous (anonymous@undisclosed.example.com) — 2013-06-03T08:36:21+0200

Export to XLS Once validation have been done, the validated result could be exported to XLS file. * To configure which sheet and which value will be exported, open Tools -> Preference * To export : File --> Export --> Identification Result --> to Excel

releasenote

Anonymous (anonymous@undisclosed.example.com) — 2012-10-05T08:02:41+0200

What's new Back Home IRMa 1.31.0 Feature * Les peptides dupliqués issus d'un même requête n'étaient pas pris en compte dans les grouping (et donc rattachés à aucune protéine). Permet de filter ou non ces peptides lors du parse de .dat (#3987) * Export XLS : Ajout de l'expectation value des peptides (

start

Anonymous (anonymous@undisclosed.example.com) — 2012-10-05T07:56:47+0200

IRMa Toolbox IRMa stands for Interprétation des Résultats Mascot® (Mascot® Results Interpretation). Download is available at the following FTP site : References : Veronique Dupierris; Christophe Masselon; Magali Court; Sylvie Kieffer-Jaquinod; Christophe Bruley A toolbox for Validation of mass spectrometry peptides identification and Generation of database: IRMa Bioinformatics 2009; doi:

msidb_irma_heidi_compat.png

Anonymous (anonymous@undisclosed.example.com) — 2012-06-27T15:20:20+0200

userguide:msidbmodele.2.pdf

Anonymous (anonymous@undisclosed.example.com) — 2012-05-21T10:58:38+0200

grouping.png

Anonymous (anonymous@undisclosed.example.com) — 2012-03-02T15:18:50+0200

userguide:singlematchexample3.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-19T16:21:56+0200

userguide:singlematchexample2.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-19T16:02:51+0200

userguide:singlematchexample1.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-19T16:02:40+0200

userguide:singlematchwindow.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-19T16:02:28+0200

userguide:statistics-fpr-closeup.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-07T18:42:07+0200

userguide:fprseeker-result.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-07T18:38:20+0200

userguide:fprseeker-dialog.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-07T18:38:07+0200

userguide:fprseeker-menu.png

Anonymous (anonymous@undisclosed.example.com) — 2011-12-07T18:37:42+0200

userguide:mascot_fragment_matches.png

Anonymous (anonymous@undisclosed.example.com) — 2011-04-12T11:50:48+0200

userguide:msidbmodeld.4.pdf

Anonymous (anonymous@undisclosed.example.com) — 2011-04-12T10:53:57+0200

msidbmodeld.4.pdf

Anonymous (anonymous@undisclosed.example.com) — 2011-04-12T10:52:42+0200