releasenote
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releasenote [2011/10/28 15:31] 132.168.72.130 |
releasenote [2012/10/05 08:02] (current) 132.168.72.131 |
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| ====== What's new ====== | ====== What's new ====== | ||
| [[:|Back Home]] | [[:|Back Home]] | ||
| + | |||
| + | ===== IRMa 1.31.0 ===== | ||
| + | |||
| + | ==== Feature ==== | ||
| + | * Les peptides dupliqués issus d'un même requête n'étaient pas pris en compte dans les grouping (et donc rattachés à aucune protéine). Permet de filter ou non ces peptides lors du parse de .dat ([[https://bioproj.extra.cea.fr/redmine/issues/3987|#3987]]) | ||
| + | * Export XLS : Ajout de l'expectation value des peptides ([[https://bioproj.extra.cea.fr/redmine/issues/5792|#5792]])+ Residue avant/apres pour les peptides dupliqués d'une même query ([[https://bioproj.extra.cea.fr/redmine/issues/4849|#4849]]) | ||
| + | * Ajout du filtre des protéines (en fonction du nombre de peptides & leur score) dans IRMa Batch/auto ([[https://bioproj.extra.cea.fr/redmine/issues/6149|#6149]]) | ||
| + | * renomme "prec. intensity" en "TIC MSMS" dans la table des peptides... | ||
| + | |||
| + | ===== IRMa 1.30.4 ===== | ||
| + | | ||
| + | :!: Compatible with MSIdb E.2. (for E.series, still and D.3 & D.4 for D.series) | ||
| + | |||
| + | ==== Bug fixing ==== | ||
| + | |||
| + | * Add leaves_match_count properties in MSIdb (version E.2). In order to increase speed for further algorithm (spectral case for instance : issue [[https://bioproj.extra.cea.fr/redmine/issues/4575|#4575]]) | ||
| + | * Exception if search settings contained Fixed PTM on multiple residues. ( issue [[https://bioproj.extra.cea.fr/redmine/issues/4393|#4393]]) | ||
| + | |||
| + | ===== IRMa 1.30.3 ===== | ||
| + | | ||
| + | ==== Bug fixing ==== | ||
| + | |||
| + | * Error in ambiguous peptides set update when running Single Peptide Per Query Filter ( issue [[https://bioproj.extra.cea.fr/redmine/issues/4524|#4524]]) | ||
| + | * Log change : When running Change Master Filter, if this operation needs ambiguous peptides to be deleted in a proteins group and these peptides belongs to other proteins groups as significant, a Warning message is displayed in log. | ||
| + | |||
| + | |||
| + | |||
| + | ===== IRMa 1.30.2 ===== | ||
| + | | ||
| + | ==== Bug fixing ==== | ||
| + | |||
| + | * encoding problem in XLS export (issue [[https://bioproj.extra.cea.fr/redmine/issues/4279|#4279]]) | ||
| + | |||
| + | |||
| + | |||
| + | ===== IRMa 1.30.1 ===== | ||
| + | | ||
| + | ==== Bug fixing ==== | ||
| + | |||
| + | * Query filter, error in query assignment (Issue [[https://bioproj.extra.cea.fr/redmine/issues/4013|#4013]]) | ||
| + | |||
| + | ===== IRMa 1.30.0 ===== | ||
| + | |||
| + | ==== Feature ==== | ||
| + | |||
| + | * Feature [[https://bioproj.extra.cea.fr/redmine/issues/835|#835]] : NEW Filter! False Positive Rate Seeker filter. See [[userguide:filtres#fpr_seeker_filter|filter documentation]] and [[autouserguide#scripts|script documentation]] to know more about its usage. | ||
| + | * Feature [[https://bioproj.extra.cea.fr/redmine/issues/835|#835]] : NEW Filter! Single match per query Filter. See [[userguide:filtres#single_match_per_query_filter|filter documentation]] and [[autouserguide#scripts|script documentation]] to know more about its usage. | ||
| + | * Features [[https://bioproj.extra.cea.fr/redmine/issues/2684|#2684]] & [[https://bioproj.extra.cea.fr/redmine/issues/2685|#2685]] : adding infos about specific peptides number and some other infos (#significant, #specific significant, Spectral count and Spectral count specific) in graphical mode and in excel export : | ||
| + | * All are added for Subset and Sameset proteins | ||
| + | * #specific significant and Spectral count specific added for Typical proteins (as the others already exist) | ||
| + | * Feature [[https://bioproj.extra.cea.fr/redmine/issues/3619|#3619]] : Precursor intensity is now displayable and exportable (in excel and MSIdb) if available in .dat file. Click on the square button in upper right corner of a peptide table to show the column. | ||
| + | |||
| + | ==== Bug fixing ==== | ||
| + | |||
| + | * Issue [[https://bioproj.extra.cea.fr/redmine/issues/2771|#2771]] : In excel export Subset proteins no longer have the spectral count of the master protein | ||
| + | * Issue [[https://bioproj.extra.cea.fr/redmine/issues/3662|#3662]] : Fixed PTMs are now displayed | ||
| + | * Issue [[https://bioproj.extra.cea.fr/redmine/issues/3766|#3766]] : Statistics curves cannot anymore go below 0 (happened in rare cases). | ||
| + | * Issue [[https://bioproj.extra.cea.fr/redmine/issues/3845|#3845]] : Log of DeltaMassFilter no longer list all properties, just used ones. | ||
| ===== IRMa 1.29.2 ===== | ===== IRMa 1.29.2 ===== | ||
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| ===== Versions précédentes ===== | ===== Versions précédentes ===== | ||
| Voir le fichier changeNotes.html de la distribution ... | Voir le fichier changeNotes.html de la distribution ... | ||
| - | |||
releasenote.1319808692.txt.gz · Last modified: 2011/10/28 15:31 by 132.168.72.130
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