userguide:filtres
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| Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
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userguide:filtres [2010/01/12 14:59] 132.168.73.9 |
userguide:filtres [2010/09/01 16:46] 132.168.73.9 |
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| ==== Master Protein Filter ==== | ==== Master Protein Filter ==== | ||
| By default the protein groups are represented by a master protein. This master protein is the same as the one defined by mascot. | By default the protein groups are represented by a master protein. This master protein is the same as the one defined by mascot. | ||
| - | If it doesn't suit your needs you have the possibility to change the master proteins one by one in the interface OR, in one step for all the protein group, by using the associated filter. | + | If it doesn't suit your needs you have the possibility to change the master proteins one by one in the interface OR, in one step for all the protein groups, by using the associated filter. |
| - | This filter using **rules** to determine which protein in the same set must be set as master. To have sufficient complexity you can **composed** multiple rules together.\\ | + | This filter use **rules** to determine which protein in the same set must be set as master. To have sufficient complexity you can **composed** multiple rules together.\\ |
| - | :!: **In a protein group the FIRST protein matches the composition of rules will be set as master.** | + | :!: **In a protein group the FIRST protein which matches the rules composition will be set as master.** \\ |
| - | :!: If no protein in the protein group matches the composition of rules, the old one is kept. | + | :!: If no protein in the protein group matches the rules composition, the old one is kept. \\ |
| + | :!: If the new master don't match some ambiguous peptides (because they belonging only to the old master) they will be deleted without asking (in contrary of manual master protein changing). | ||
| === The rules === | === The rules === | ||
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| == Example 2 == | == Example 2 == | ||
| - | {{:userguide:master-filter-window-2.png|}} | + | {{:userguide:master-filter-window-2.png|}}\\ |
| In this example, will be set as master the first protein of each protein group which have : | In this example, will be set as master the first protein of each protein group which have : | ||
| * Its Accession number not containing 'P5098' | * Its Accession number not containing 'P5098' | ||
userguide/filtres.txt · Last modified: 2011/12/19 16:32 by 132.168.72.130
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