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firststeps [2009/04/20 09:06]
firststeps [2010/01/05 15:40]
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-===== Connecting ===== +  * First of all you need to [[how_to:​dbconnection|get a connection on the MSI db]] (Mass Spectrometer Identification database)\\ 
- +  * The next step is to [[how to:createProject|create an hEIDI project]]\\ 
-First of all, we need to get a connection on Mass Spectrometer Identification database ​(MSI db) +  Then you are ready to [[how_to:​opensession|open ​working session on the MSI db]]\\ 
-In the Service window, select the database server hosting the MSI DB and enter connection properties in approprated field. +  * At this stage, ​hEIDI opens two new tabs (windows) 
- +    ​* ​the identifications tab contains all the identification results of the selected MSIdb  
-{{:connect.png|}} +    ​* ​the other tab contains all user and mascot [[.:​userguide:​contextdefinition|contexts]]. Context ​is a central notion in hEIDIBasically, it contains identification results ​ 
- +  ​* ​You can [[.:​how_to:​browsecontextprotgroups|browse the content]] of context ​and view a [[how_to:viewprotgroups|protein group detail]] 
-**Connection ​to a postgres server** +   
- +To go further read other sections of the [[.:​start:​|documentation]]
-===== hEIDI Projects ===== +
- +
-It is possible to create hEIDI projects in order to organise data. For now, data consist of SQL queries... +
-To create a Project, click right in the ''​Project''​ window or choose ''​File > New Project''​ menu and only specify ​the project name in the wizard. ​ +
- +
- +
-===== SQL Queries ===== +
- +
-Once the connection is successful, the first simple feature is to explore the database or create SQL queriesThe MSI database model is available here (FIXME)+
- +
-You can create new SQL files from hEIDI project (''​File > New File''​ menu then choose ''​Empty File''​ or directly ''​New Empty File''​ from hEIDI Project window) ​It is also possible to select ​Table under database connection ​and choose ''​Veiw Data''​. +
- +
-{{:sql_comment.png|}} +
- +
-** SQL queries sample ** +
- +
- +
-===== Open MSI Session ===== +
- +
-To open a working session on the MS identification database, select the connection in ''​Service Window''​ and open menu ''​MS Identification > Open session''​. +
- +
firststeps.txt · Last modified: 2010/01/05 15:40 by